J4_5T2C_009

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUAA*UC*GUG*CGCC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|A|G|4587
5T2C|1|A|U|4588
5T2C|1|A|A|4589
5T2C|1|A|A|4590
*
5T2C|1|A|U|4620
5T2C|1|A|C|4621
*
5T2C|1|A|G|4676
5T2C|1|A|U|4677
5T2C|1|A|G|4678
*
5T2C|1|A|C|4712
5T2C|1|A|G|4713
5T2C|1|A|C|4714
5T2C|1|A|C|4715

Current chains

Chain A

28S rRNA

Nearby chains

Chain E

60S ribosomal protein L3

Chain I

60S ribosomal protein L13a

Chain P

60S ribosomal protein L23