J4_6BZ8_002

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

GAG*CAUGUG*CAAAG*CGC

Length

17 nucleotides

Bulged bases

6BZ8|1|QA|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_6BZ8_002 not in the Motif Atlas

Homologous match to J4_4LFB_002

Geometric discrepancy: 0.1205

The information below is about J4_4LFB_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_88771.1

Basepair signature

cWW-tSS-cWW-tSS-cWW-cWW-tWH-tWH-cSH-cWW

Number of instances in this motif group

1

Unit IDs

6BZ8|1|QA|G|142
6BZ8|1|QA|A|143
6BZ8|1|QA|G|144
*
6BZ8|1|QA|C|178
6BZ8|1|QA|A|179
6BZ8|1|QA|U|180
6BZ8|1|QA|G|181
6BZ8|1|QA|U|182
6BZ8|1|QA|G|183
*
6BZ8|1|QA|C|194
6BZ8|1|QA|A|195
6BZ8|1|QA|A|196
6BZ8|1|QA|A|197
6BZ8|1|QA|G|198
*
6BZ8|1|QA|C|219
6BZ8|1|QA|G|220
6BZ8|1|QA|C|221

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QT

30S ribosomal protein S20