J4_6FRK_012

3D structure

PDB id

6FRK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUAA*UC*GUG*CGCC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FRK|1|5|G|4587
6FRK|1|5|U|4588
6FRK|1|5|A|4589
6FRK|1|5|A|4590
*
6FRK|1|5|U|4620
6FRK|1|5|C|4621
*
6FRK|1|5|G|4676
6FRK|1|5|U|4677
6FRK|1|5|G|4678
*
6FRK|1|5|C|4712
6FRK|1|5|G|4713
6FRK|1|5|C|4714
6FRK|1|5|C|4715

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain B

Ribosomal protein uL3

Chain O

Ribosomal protein uL13

Chain V

Ribosomal protein L23