J4_6I7O_020
3D structure
- PDB id
- 6I7O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- UC*GGUUAG*CC*GGUCGUA
- Length
- 17 nucleotides
- Bulged bases
- 6I7O|1|YQ|U|1523
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6I7O|1|YQ|U|1495
6I7O|1|YQ|C|1496
*
6I7O|1|YQ|G|1520
6I7O|1|YQ|G|1521
6I7O|1|YQ|U|1522
6I7O|1|YQ|U|1523
6I7O|1|YQ|A|1524
6I7O|1|YQ|G|1525
*
6I7O|1|YQ|C|1614
6I7O|1|YQ|C|1615
*
6I7O|1|YQ|G|1829
6I7O|1|YQ|G|1830
6I7O|1|YQ|U|1831
6I7O|1|YQ|C|1832
6I7O|1|YQ|G|1833
6I7O|1|YQ|U|1834
6I7O|1|YQ|A|1835
Current chains
- Chain YQ
- 25S ribosomal RNA
Nearby chains
- Chain XH
- 60S ribosomal protein L25
- Chain XI
- 60S ribosomal protein L38
- Chain XL
- 60S ribosomal protein L39
- Chain YF
- 60S ribosomal protein L19-A
- Chain YN
- 60S ribosomal protein L34-A
- Chain YS
- 5.8S ribosomal RNA; 5.8S rRNA
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