J4_6I7V_014

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

AACUG*CACAG*UGAC*GUAAU

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_6I7V_014 not in the Motif Atlas

Homologous match to J4_5J7L_025

Geometric discrepancy: 0.0916

The information below is about J4_5J7L_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_61477.5

Basepair signature

cWW-tSW-F-tHS-tHS-F-cWW-cWW-F-tHS-cWW

Number of instances in this motif group

4

Unit IDs

6I7V|1|CA|A|1772
6I7V|1|CA|A|1773
6I7V|1|CA|C|1774
6I7V|1|CA|U|1775
6I7V|1|CA|G|1776
*
6I7V|1|CA|C|1788
6I7V|1|CA|A|1789
6I7V|1|CA|C|1790
6I7V|1|CA|A|1791
6I7V|1|CA|G|1792
*
6I7V|1|CA|U|1827
6I7V|1|CA|G|1828
6I7V|1|CA|A|1829
6I7V|1|CA|C|1830
*
6I7V|1|CA|G|1975
6I7V|1|CA|U|1976
6I7V|1|CA|A|1977
6I7V|1|CA|A|1978
6I7V|1|CA|U|1979

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CC

50S ribosomal protein L2