J4_6LKQ_010
3D structure
- PDB id
- 6LKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GG*UU*AC*GC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6LKQ_010 not in the Motif Atlas
- Homologous match to J4_5J7L_024
- Geometric discrepancy: 0.1114
- The information below is about J4_5J7L_024
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_24280.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
6LKQ|1|t|G|1444
6LKQ|1|t|G|1445
*
6LKQ|1|t|U|1466
6LKQ|1|t|U|1467
*
6LKQ|1|t|A|1525
6LKQ|1|t|C|1526
*
6LKQ|1|t|G|1546
6LKQ|1|t|C|1547
Current chains
- Chain t
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: