J4_6NUO_022
3D structure
- PDB id
- 6NUO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GGUUC*GGUUAG*CU*ACCCGUAC
- Length
- 21 nucleotides
- Bulged bases
- 6NUO|1|YA|U|1387
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6NUO_022 not in the Motif Atlas
- Homologous match to J4_9DFE_004
- Geometric discrepancy: 0.0764
- The information below is about J4_9DFE_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_69051.6
- Basepair signature
- cWW-F-cWW-F-tHW-F-cWW-F-F-F-F-F-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
6NUO|1|YA|G|1356
6NUO|1|YA|G|1357
6NUO|1|YA|U|1358
6NUO|1|YA|U|1359
6NUO|1|YA|C|1360
*
6NUO|1|YA|G|1384
6NUO|1|YA|G|1385
6NUO|1|YA|U|1386
6NUO|1|YA|U|1387
6NUO|1|YA|A|1388
6NUO|1|YA|G|1389
*
6NUO|1|YA|C|1450
6NUO|1|YA|U|1451
*
6NUO|1|YA|A|1643
6NUO|1|YA|C|1644
6NUO|1|YA|C|1645
6NUO|1|YA|C|1646
6NUO|1|YA|G|1647
6NUO|1|YA|U|1648
6NUO|1|YA|A|1649
6NUO|1|YA|C|1650
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y7
- 50S ribosomal protein L34
- Chain YX
- 50S ribosomal protein L23
Coloring options: