J4_6O90_003
3D structure
- PDB id
- 6O90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.49 Å
Loop
- Sequence
- CGAG*CGCAG*CGAGU*GCGAAUGAG
- Length
- 23 nucleotides
- Bulged bases
- 6O90|1|A|U|693, 6O90|1|A|G|694
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6O90_003 not in the Motif Atlas
- Homologous match to J4_4WF9_003
- Geometric discrepancy: 0.1765
- The information below is about J4_4WF9_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_69347.1
- Basepair signature
- cWW-F-F-F-F-cWW-F-F-F-cWW-F-F-F-cWW-F-F
- Number of instances in this motif group
- 1
Unit IDs
6O90|1|A|C|638
6O90|1|A|G|639
6O90|1|A|A|640
6O90|1|A|G|641
*
6O90|1|A|C|663
6O90|1|A|G|664
6O90|1|A|C|665
6O90|1|A|A|666
6O90|1|A|G|667
*
6O90|1|A|C|674
6O90|1|A|G|675
6O90|1|A|A|676
6O90|1|A|G|677
6O90|1|A|U|678
*
6O90|1|A|G|688
6O90|1|A|C|689
6O90|1|A|G|690
6O90|1|A|A|691
6O90|1|A|A|692
6O90|1|A|U|693
6O90|1|A|G|694
6O90|1|A|A|695
6O90|1|A|G|696
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 5
- 50S ribosomal protein L35
- Chain E
- 50S ribosomal protein L4
- Chain M
- 50S ribosomal protein L15
Coloring options: