J4_6OLF_013

3D structure

PDB id

6OLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUAA*UC*GUG*CGCC

Length

13 nucleotides

Bulged bases

6OLF|1|t|A|4551, 6OLF|1|t|U|4639

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLF|1|t|G|4549
6OLF|1|t|U|4550
6OLF|1|t|A|4551
6OLF|1|t|A|4552
*
6OLF|1|t|U|4582
6OLF|1|t|C|4583
*
6OLF|1|t|G|4638
6OLF|1|t|U|4639
6OLF|1|t|G|4640
*
6OLF|1|t|C|4674
6OLF|1|t|G|4675
6OLF|1|t|C|4676
6OLF|1|t|C|4677

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain P

60S ribosomal protein L13a

Chain W

60S ribosomal protein L23