J4_6UCQ_031

3D structure

PDB id

6UCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome recycling complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GAG*CAUGUG*CAAAG*CGC

Length

17 nucleotides

Bulged bases

6UCQ|1|1a|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_6UCQ_031 not in the Motif Atlas

Homologous match to J4_4LFB_002

Geometric discrepancy: 0.1308

The information below is about J4_4LFB_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_88771.1

Basepair signature

cWW-tSS-cWW-tSS-cWW-cWW-tWH-tWH-cSH-cWW

Number of instances in this motif group

1

Unit IDs

6UCQ|1|1a|G|142
6UCQ|1|1a|A|143
6UCQ|1|1a|G|144
*
6UCQ|1|1a|C|178
6UCQ|1|1a|A|179
6UCQ|1|1a|U|180
6UCQ|1|1a|G|181
6UCQ|1|1a|U|182
6UCQ|1|1a|G|183
*
6UCQ|1|1a|C|194
6UCQ|1|1a|A|195
6UCQ|1|1a|A|196
6UCQ|1|1a|A|197
6UCQ|1|1a|G|198
*
6UCQ|1|1a|C|219
6UCQ|1|1a|G|220
6UCQ|1|1a|C|221

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains

Chain 1t

30S ribosomal protein S20