J4_6W7W_003
3D structure
- PDB id
- 6W7W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S-Inactive-low-Mg2+ Class B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GCG*CGAAAG*CCGUAAACGAUG*CC
- Length
- 23 nucleotides
- Bulged bases
- 6W7W|1|2|C|576
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6W7W_003 not in the Motif Atlas
- Homologous match to J4_4LFB_003
- Geometric discrepancy: 0.1992
- The information below is about J4_4LFB_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_61885.6
- Basepair signature
- cWW-cWW-cWW-F-F-tHW-F-F-F-F-F-cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
6W7W|1|2|G|575
6W7W|1|2|C|576
6W7W|1|2|G|577
*
6W7W|1|2|C|764
6W7W|1|2|G|765
6W7W|1|2|A|766
6W7W|1|2|A|767
6W7W|1|2|A|768
6W7W|1|2|G|769
*
6W7W|1|2|C|810
6W7W|1|2|C|811
6W7W|1|2|G|812
6W7W|1|2|U|813
6W7W|1|2|A|814
6W7W|1|2|A|815
6W7W|1|2|A|816
6W7W|1|2|C|817
6W7W|1|2|G|818
6W7W|1|2|A|819
6W7W|1|2|U|820
6W7W|1|2|G|821
*
6W7W|1|2|C|879
6W7W|1|2|C|880
Current chains
- Chain 2
- 16S rRNA
Nearby chains
- Chain G
- 30S ribosomal protein S8
- Chain K
- 30S ribosomal protein S12
- Chain N
- 30S ribosomal protein S15
- Chain P
- 30S ribosomal protein S17
Coloring options: