J4_6WOO_012
3D structure
- PDB id
- 6WOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUAAG*UUG*CC*GUG
- Length
- 13 nucleotides
- Bulged bases
- 6WOO|1|5|A|2657
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6WOO|1|5|C|2654
6WOO|1|5|U|2655
6WOO|1|5|A|2656
6WOO|1|5|A|2657
6WOO|1|5|G|2658
*
6WOO|1|5|U|2712
6WOO|1|5|U|2713
6WOO|1|5|G|2714
*
6WOO|1|5|C|2741
6WOO|1|5|C|2742
*
6WOO|1|5|G|2751
6WOO|1|5|U|2752
6WOO|1|5|G|2753
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain D
- uL18
- Chain T
- eL21
- Chain o
- eL42
Coloring options: