J4_6XZA_002
3D structure
- PDB id
- 6XZA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- GAG*CAUAACG*CCAAAG*UGC
- Length
- 19 nucleotides
- Bulged bases
- 6XZA|1|A1|C|183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6XZA_002 not in the Motif Atlas
- Homologous match to J4_5J7L_002
- Geometric discrepancy: 0.1074
- The information below is about J4_5J7L_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_01665.1
- Basepair signature
- cWW-tWH-F-tWH-cWW-tSS-F-tHW-tSS-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
6XZA|1|A1|G|142
6XZA|1|A1|A|143
6XZA|1|A1|G|144
*
6XZA|1|A1|C|178
6XZA|1|A1|A|179
6XZA|1|A1|U|180
6XZA|1|A1|A|181
6XZA|1|A1|A|182
6XZA|1|A1|C|183
6XZA|1|A1|G|184
*
6XZA|1|A1|C|193
6XZA|1|A1|C|194
6XZA|1|A1|A|195
6XZA|1|A1|A|196
6XZA|1|A1|A|197
6XZA|1|A1|G|198
*
6XZA|1|A1|U|219
6XZA|1|A1|G|220
6XZA|1|A1|C|221
Current chains
- Chain A1
- 16S rRNA
Nearby chains
- Chain T1
- 30S ribosomal protein S20
Coloring options: