J4_7AZO_004
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GAGUAACG*UC*GUAG*CC
- Length
- 16 nucleotides
- Bulged bases
- 7AZO|1|16SB|C|760
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7AZO_004 not in the Motif Atlas
- Homologous match to J4_4LFB_001
- Geometric discrepancy: 0.0835
- The information below is about J4_4LFB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_90044.1
- Basepair signature
- cWW-F-cWW-F-F-F-tHW-F-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7AZO|1|16SB|G|754
7AZO|1|16SB|A|755
7AZO|1|16SB|G|756
7AZO|1|16SB|U|757
7AZO|1|16SB|A|758
7AZO|1|16SB|A|759
7AZO|1|16SB|C|760
7AZO|1|16SB|G|761
*
7AZO|1|16SB|U|880
7AZO|1|16SB|C|881
*
7AZO|1|16SB|G|927
7AZO|1|16SB|U|928
7AZO|1|16SB|A|929
7AZO|1|16SB|G|930
*
7AZO|1|16SB|C|952
7AZO|1|16SB|C|953
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain S12B
- 30S ribosomal protein S12
- Chain S16B
- 30S ribosomal protein S16
- Chain S17B
- 30S ribosomal protein S17
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