J4_7AZS_025
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CAAAG*CUGAC*GGG*CGG
- Length
- 16 nucleotides
- Bulged bases
- 7AZS|1|23SB|A|2303
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7AZS_025 not in the Motif Atlas
- Homologous match to J4_5J7L_027
- Geometric discrepancy: 0.1946
- The information below is about J4_5J7L_027
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_04930.6
- Basepair signature
- cWW-F-F-tWW-tHH-cWW-cWW-cHW-cWW
- Number of instances in this motif group
- 7
Unit IDs
7AZS|1|23SB|C|2300
7AZS|1|23SB|A|2301
7AZS|1|23SB|A|2302
7AZS|1|23SB|A|2303
7AZS|1|23SB|G|2304
*
7AZS|1|23SB|C|2358
7AZS|1|23SB|U|2359
7AZS|1|23SB|G|2360
7AZS|1|23SB|A|2361
7AZS|1|23SB|C|2362
*
7AZS|1|23SB|G|2385
7AZS|1|23SB|G|2386
7AZS|1|23SB|G|2387
*
7AZS|1|23SB|C|2396
7AZS|1|23SB|G|2397
7AZS|1|23SB|G|2398
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L18B
- 50S ribosomal protein L18
- Chain L27B
- 50S ribosomal protein L27
- Chain L33B
- 50S ribosomal protein L33
- Chain L35B
- 50S ribosomal protein L35
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