3D structure

PDB id
7K50 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation non-frameshifting(CCA-A) complex (Structure I)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
GAGUAAUG*UG*CUAG*CC
Length
16 nucleotides
Bulged bases
7K50|1|3|U|121
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7K50|1|3|G|115
7K50|1|3|A|116
7K50|1|3|G|117
7K50|1|3|U|118
7K50|1|3|A|119
7K50|1|3|A|120
7K50|1|3|U|121
7K50|1|3|G|122
*
7K50|1|3|U|239
7K50|1|3|G|240
*
7K50|1|3|C|286
7K50|1|3|U|287
7K50|1|3|A|288
7K50|1|3|G|289
*
7K50|1|3|C|311
7K50|1|3|C|312

Current chains

Chain 3
16S ribosomal RNA

Nearby chains

Chain U
30S ribosomal protein S16
Chain V
30S ribosomal protein S17

Coloring options:

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