J4_7MPI_005

3D structure

PDB id

7MPI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stm1 bound vacant 80S structure isolated from cbf5-D95A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GG*CUUAAC*GGAAGAG*UC

Length

17 nucleotides

Bulged bases

7MPI|1|A1|G|1751

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MPI|1|A1|G|1674
7MPI|1|A1|G|1675
*
7MPI|1|A1|C|1693
7MPI|1|A1|U|1694
7MPI|1|A1|U|1695
7MPI|1|A1|A|1696
7MPI|1|A1|A|1697
7MPI|1|A1|C|1698
*
7MPI|1|A1|G|1747
7MPI|1|A1|G|1748
7MPI|1|A1|A|1749
7MPI|1|A1|A|1750
7MPI|1|A1|G|1751
7MPI|1|A1|A|1752
7MPI|1|A1|G|1753
*
7MPI|1|A1|U|1772
7MPI|1|A1|C|1773

Current chains

Chain A1

25S rRNA

Nearby chains

Chain AU

60S ribosomal protein L22-A

Chain Ag

60S ribosomal protein L34-A

Chain Ak

60S ribosomal protein L38