J4_7MT3_004

3D structure

PDB id

7MT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S with P/E tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGUUC*GGUGAG*CC*GCCCGUAC

Length

21 nucleotides

Bulged bases

7MT3|1|A|G|1472

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_7MT3_004 not in the Motif Atlas

Homologous match to J4_4WF9_005

Geometric discrepancy: 0.105

The information below is about J4_4WF9_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_69051.6

Basepair signature

cWW-F-cWW-F-tHW-F-cWW-F-F-F-F-F-cWW-cWW

Number of instances in this motif group

7

Unit IDs

7MT3|1|A|G|1441
7MT3|1|A|G|1442
7MT3|1|A|U|1443
7MT3|1|A|U|1444
7MT3|1|A|C|1445
*
7MT3|1|A|G|1469
7MT3|1|A|G|1470
7MT3|1|A|U|1471
7MT3|1|A|G|1472
7MT3|1|A|A|1473
7MT3|1|A|G|1474
*
7MT3|1|A|C|1535
7MT3|1|A|C|1536
*
7MT3|1|A|G|1832
7MT3|1|A|C|1833
7MT3|1|A|C|1834
7MT3|1|A|C|1835
7MT3|1|A|G|1836
7MT3|1|A|U|1837
7MT3|1|A|A|1838
7MT3|1|A|C|1839

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain T

50S ribosomal protein L23