J4_7N31_011

3D structure

PDB id

7N31 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a post-translocation (POST) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

AACUG*CACAG*UGAC*GUAAU

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_7N31_011 not in the Motif Atlas

Homologous match to J4_5J7L_025

Geometric discrepancy: 0.0443

The information below is about J4_5J7L_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_61477.5

Basepair signature

cWW-tSW-F-tHS-tHS-F-cWW-cWW-F-tHS-cWW

Number of instances in this motif group

4

Unit IDs

7N31|1|23|A|1772
7N31|1|23|A|1773
7N31|1|23|C|1774
7N31|1|23|U|1775
7N31|1|23|G|1776
*
7N31|1|23|C|1788
7N31|1|23|A|1789
7N31|1|23|C|1790
7N31|1|23|A|1791
7N31|1|23|G|1792
*
7N31|1|23|U|1827
7N31|1|23|G|1828
7N31|1|23|A|1829
7N31|1|23|C|1830
*
7N31|1|23|G|1975
7N31|1|23|U|1976
7N31|1|23|A|1977
7N31|1|23|A|1978
7N31|1|23|U|1979

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LB

50S ribosomal protein L2