J4_7OBR_003

3D structure

PDB id

7OBR (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP early complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CAAAUAU*AGG*CAUGUU*AG

Length

18 nucleotides

Bulged bases

7OBR|1|5|A|2366, 7OBR|1|5|U|2369, 7OBR|1|5|U|2828

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OBR|1|5|C|2365
7OBR|1|5|A|2366
7OBR|1|5|A|2367
7OBR|1|5|A|2368
7OBR|1|5|U|2369
7OBR|1|5|A|2370
7OBR|1|5|U|2371
*
7OBR|1|5|A|2389
7OBR|1|5|G|2390
7OBR|1|5|G|2391
*
7OBR|1|5|C|2824
7OBR|1|5|A|2825
7OBR|1|5|U|2826
7OBR|1|5|G|2827
7OBR|1|5|U|2828
7OBR|1|5|U|2829
*
7OBR|1|5|A|3856
7OBR|1|5|G|3857

Current chains

Chain 5

28S rRNA

Nearby chains

Chain P

uL22

Chain R

60S RIBOSOMAL PROTEIN EL19

Chain d

eL31