J4_7OW7_004

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

(OMC)AAAUAU*AGG*(OMC)AUGUU*AG

Length

18 nucleotides

Bulged bases

7OW7|1|A|A|2366, 7OW7|1|A|U|2369, 7OW7|1|A|U|2828

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OW7|1|A|OMC|2365
7OW7|1|A|A|2366
7OW7|1|A|A|2367
7OW7|1|A|A|2368
7OW7|1|A|U|2369
7OW7|1|A|A|2370
7OW7|1|A|U|2371
*
7OW7|1|A|A|2389
7OW7|1|A|G|2390
7OW7|1|A|G|2391
*
7OW7|1|A|OMC|2824
7OW7|1|A|A|2825
7OW7|1|A|U|2826
7OW7|1|A|G|2827
7OW7|1|A|U|2828
7OW7|1|A|U|2829
*
7OW7|1|A|A|3856
7OW7|1|A|G|3857

Current chains

Chain A

28S rRNA

Nearby chains

Chain J

60S ribosomal protein L17

Chain L

60S ribosomal protein L19

Chain X

60S ribosomal protein L31