J4_7PHC_009
3D structure
- PDB id
- 7PHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.9 Å
Loop
- Sequence
- GUGU*AGG*CUAUU*AUC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7PHC_009 not in the Motif Atlas
- Homologous match to J4_5J7L_028
- Geometric discrepancy: 0.2899
- The information below is about J4_5J7L_028
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_77044.4
- Basepair signature
- cWW-F-tHS-F-cWW-cWW-cWW-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
7PHC|1|3|G|2651
7PHC|1|3|U|2652
7PHC|1|3|G|2653
7PHC|1|3|U|2654
*
7PHC|1|3|A|2682
7PHC|1|3|G|2683
7PHC|1|3|G|2684
*
7PHC|1|3|C|2739
7PHC|1|3|U|2740
7PHC|1|3|A|2741
7PHC|1|3|U|2742
7PHC|1|3|U|2743
*
7PHC|1|3|A|2777
7PHC|1|3|U|2778
7PHC|1|3|C|2779
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain b
- 50S ribosomal protein L3
- Chain i
- 50S ribosomal protein L13
- Chain j
- 50S ribosomal protein L14
Coloring options: