3D structure

PDB id
7Q08 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of Candida albicans 80S ribosome in complex with cycloheximide
Experimental method
ELECTRON MICROSCOPY
Resolution
2.56 Å

Loop

Sequence
UC*GAGUCG*CUAAGUG*UAAA
Length
19 nucleotides
Bulged bases
7Q08|1|1|U|298
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J4_7Q08_001 not in the Motif Atlas
Homologous match to J4_8C3A_001
Geometric discrepancy: 0.0533
The information below is about J4_8C3A_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7Q08|1|1|U|111
7Q08|1|1|C|112
*
7Q08|1|1|G|267
7Q08|1|1|A|268
7Q08|1|1|G|269
7Q08|1|1|U|270
7Q08|1|1|C|271
7Q08|1|1|G|272
*
7Q08|1|1|C|293
7Q08|1|1|U|294
7Q08|1|1|A|295
7Q08|1|1|A|296
7Q08|1|1|G|297
7Q08|1|1|U|298
7Q08|1|1|G|299
*
7Q08|1|1|U|316
7Q08|1|1|A|317
7Q08|1|1|A|318
7Q08|1|1|A|319

Current chains

Chain 1
25S ribosomal RNA

Nearby chains

Chain AI
Ribosomal 60S subunit protein L35A
Chain AJ
60S ribosomal protein L36
Chain t
60S ribosomal protein L13
Chain v
Ribosomal protein L15

Coloring options:


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