J4_7QV3_002

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

CC*GAGUAC*GGAAUCCG*CAAG

Length

20 nucleotides

Bulged bases

7QV3|1|V|C|452

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_7QV3_002 not in the Motif Atlas

Homologous match to J4_4WF9_001

Geometric discrepancy: 0.202

The information below is about J4_4WF9_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_94698.1

Basepair signature

cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-cWW

Number of instances in this motif group

10

Unit IDs

7QV3|1|V|C|271
7QV3|1|V|C|272
*
7QV3|1|V|G|417
7QV3|1|V|A|418
7QV3|1|V|G|419
7QV3|1|V|U|420
7QV3|1|V|A|421
7QV3|1|V|C|422
*
7QV3|1|V|G|446
7QV3|1|V|G|447
7QV3|1|V|A|448
7QV3|1|V|A|449
7QV3|1|V|U|450
7QV3|1|V|C|451
7QV3|1|V|C|452
7QV3|1|V|G|453
*
7QV3|1|V|C|468
7QV3|1|V|A|469
7QV3|1|V|A|470
7QV3|1|V|G|471

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain X

50S ribosomal protein L9

Chain u

50S ribosomal protein L28