J4_7QV3_003

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

UGAAG*CGCC*GGA*UGUAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_7QV3_003 not in the Motif Atlas

Homologous match to J4_7A0S_002

Geometric discrepancy: 0.1366

The information below is about J4_7A0S_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_16174.1

Basepair signature

cWW-tSH-cHH-F-F-tHS-cWW-cWW-F-F-cWW

Number of instances in this motif group

5

Unit IDs

7QV3|1|V|U|340
7QV3|1|V|G|341
7QV3|1|V|A|342
7QV3|1|V|A|343
7QV3|1|V|G|344
*
7QV3|1|V|C|360
7QV3|1|V|G|361
7QV3|1|V|C|362
7QV3|1|V|C|363
*
7QV3|1|V|G|367
7QV3|1|V|G|368
7QV3|1|V|A|369
*
7QV3|1|V|U|381
7QV3|1|V|G|382
7QV3|1|V|U|383
7QV3|1|V|A|384
7QV3|1|V|G|385

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain U

50S ribosomal protein L24