J4_7QV3_006

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

GUUUC*GGUUAG*CC*GCCCGUAC

Length

21 nucleotides

Bulged bases

7QV3|1|V|U|1380

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_7QV3_006 not in the Motif Atlas

Homologous match to J4_9DFE_004

Geometric discrepancy: 0.1221

The information below is about J4_9DFE_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_77353.1

Basepair signature

cWW-F-cWW-F-tHW-F-cWW-F-F-F-F-F-cWW-cWW

Number of instances in this motif group

8

Unit IDs

7QV3|1|V|G|1349
7QV3|1|V|U|1350
7QV3|1|V|U|1351
7QV3|1|V|U|1352
7QV3|1|V|C|1353
*
7QV3|1|V|G|1377
7QV3|1|V|G|1378
7QV3|1|V|U|1379
7QV3|1|V|U|1380
7QV3|1|V|A|1381
7QV3|1|V|G|1382
*
7QV3|1|V|C|1443
7QV3|1|V|C|1444
*
7QV3|1|V|G|1642
7QV3|1|V|C|1643
7QV3|1|V|C|1644
7QV3|1|V|C|1645
7QV3|1|V|G|1646
7QV3|1|V|U|1647
7QV3|1|V|A|1648
7QV3|1|V|C|1649

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain T

50S ribosomal protein L23