J4_7QVP_021
3D structure
- PDB id
- 7QVP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human collided disome (di-ribosome) stalled on XBP1 mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAAAUAU*AGG*CAUGUU*AG
- Length
- 18 nucleotides
- Bulged bases
- 7QVP|1|L6|A|2366, 7QVP|1|L6|U|2369, 7QVP|1|L6|U|2828
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QVP|1|L6|C|2365
7QVP|1|L6|A|2366
7QVP|1|L6|A|2367
7QVP|1|L6|A|2368
7QVP|1|L6|U|2369
7QVP|1|L6|A|2370
7QVP|1|L6|U|2371
*
7QVP|1|L6|A|2389
7QVP|1|L6|G|2390
7QVP|1|L6|G|2391
*
7QVP|1|L6|C|2824
7QVP|1|L6|A|2825
7QVP|1|L6|U|2826
7QVP|1|L6|G|2827
7QVP|1|L6|U|2828
7QVP|1|L6|U|2829
*
7QVP|1|L6|A|3856
7QVP|1|L6|G|3857
Current chains
- Chain L6
- 28S ribosomal RNA
Nearby chains
- Chain MP
- 60S ribosomal protein L17
- Chain MR
- 60S ribosomal protein L19
- Chain Md
- 60S ribosomal protein L31
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