3D structure

PDB id
7ST2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
AACUG*CACAG*UGAC*GUAAU
Length
19 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J4_7ST2_007 not in the Motif Atlas
Homologous match to J4_5J7L_025
Geometric discrepancy: 0.0478
The information below is about J4_5J7L_025
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J4_61477.5
Basepair signature
cWW-tSW-F-tHS-tHS-F-cWW-cWW-F-tHS-cWW
Number of instances in this motif group
4

Unit IDs

7ST2|1|1|A|1772
7ST2|1|1|A|1773
7ST2|1|1|C|1774
7ST2|1|1|U|1775
7ST2|1|1|G|1776
*
7ST2|1|1|C|1788
7ST2|1|1|A|1789
7ST2|1|1|C|1790
7ST2|1|1|A|1791
7ST2|1|1|G|1792
*
7ST2|1|1|U|1827
7ST2|1|1|G|1828
7ST2|1|1|A|1829
7ST2|1|1|C|1830
*
7ST2|1|1|G|1975
7ST2|1|1|U|1976
7ST2|1|1|A|1977
7ST2|1|1|A|1978
7ST2|1|1|U|1979

Current chains

Chain 1
23S rRNA

Nearby chains

Chain b
50S ribosomal protein L2

Coloring options:


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