J4_7TOQ_006
3D structure
- PDB id
- 7TOQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAAAUAU*AGG*CAUGUU*AG
- Length
- 18 nucleotides
- Bulged bases
- 7TOQ|1|A25S|A|2366, 7TOQ|1|A25S|U|2369, 7TOQ|1|A25S|U|2828
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7TOQ|1|A25S|C|2365
7TOQ|1|A25S|A|2366
7TOQ|1|A25S|A|2367
7TOQ|1|A25S|A|2368
7TOQ|1|A25S|U|2369
7TOQ|1|A25S|A|2370
7TOQ|1|A25S|U|2371
*
7TOQ|1|A25S|A|2389
7TOQ|1|A25S|G|2390
7TOQ|1|A25S|G|2391
*
7TOQ|1|A25S|C|2824
7TOQ|1|A25S|A|2825
7TOQ|1|A25S|U|2826
7TOQ|1|A25S|G|2827
7TOQ|1|A25S|U|2828
7TOQ|1|A25S|U|2829
*
7TOQ|1|A25S|A|3856
7TOQ|1|A25S|G|3857
Current chains
- Chain A25S
- 28S rRNA
Nearby chains
- Chain AL17
- 60S ribosomal protein L17
- Chain AL19
- 60S ribosomal protein L19
- Chain AL31
- 60S ribosomal protein L31
Coloring options: