J4_7UNU_013
3D structure
- PDB id
- 7UNU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUG*CAUACGU*AGAAAG*CGC
- Length
- 19 nucleotides
- Bulged bases
- 7UNU|1|a|A|191
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7UNU_013 not in the Motif Atlas
- Homologous match to J4_5J7L_002
- Geometric discrepancy: 0.4419
- The information below is about J4_5J7L_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_01665.1
- Basepair signature
- cWW-tWH-F-tWH-cWW-tSS-F-tHW-tSS-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
7UNU|1|a|G|136
7UNU|1|a|U|137
7UNU|1|a|G|138
*
7UNU|1|a|C|172
7UNU|1|a|A|173
7UNU|1|a|U|174
7UNU|1|a|A|175
7UNU|1|a|C|176
7UNU|1|a|G|177
7UNU|1|a|U|178
*
7UNU|1|a|A|187
7UNU|1|a|G|188
7UNU|1|a|A|189
7UNU|1|a|A|190
7UNU|1|a|A|191
7UNU|1|a|G|192
*
7UNU|1|a|C|213
7UNU|1|a|G|214
7UNU|1|a|C|215
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain t
- 30S ribosomal protein S20
Coloring options: