J4_7UPH_013

3D structure

PDB id

7UPH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a ribosome with tethered subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

4.18 Å

Loop

Sequence

GGGC*GAC*GGAAGA*UUGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UPH|1|I|G|4137
7UPH|1|I|G|4138
7UPH|1|I|G|4139
7UPH|1|I|C|4140
*
7UPH|1|I|G|4168
7UPH|1|I|A|4169
7UPH|1|I|C|4170
*
7UPH|1|I|G|4225
7UPH|1|I|G|4226
7UPH|1|I|A|4227
7UPH|1|I|A|4228
7UPH|1|I|G|4229
7UPH|1|I|A|4230
*
7UPH|1|I|U|4262
7UPH|1|I|U|4263
7UPH|1|I|G|4264
7UPH|1|I|C|4265

Current chains

Chain I

Tethered rRNA

Nearby chains

Chain L

50S ribosomal protein L3

Chain R

50S ribosomal protein L13

Chain S

50S ribosomal protein L14