J4_7UVZ_008
3D structure
- PDB id
- 7UVZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- AACUG*CAUAG*UGAU*AUAAU
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7UVZ_008 not in the Motif Atlas
- Homologous match to J4_5J7L_025
- Geometric discrepancy: 0.0569
- The information below is about J4_5J7L_025
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_61477.5
- Basepair signature
- cWW-tSW-F-tHS-tHS-F-cWW-cWW-F-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7UVZ|1|A|A|1768
7UVZ|1|A|A|1769
7UVZ|1|A|C|1770
7UVZ|1|A|U|1771
7UVZ|1|A|G|1772
*
7UVZ|1|A|C|1784
7UVZ|1|A|A|1785
7UVZ|1|A|U|1786
7UVZ|1|A|A|1787
7UVZ|1|A|G|1788
*
7UVZ|1|A|U|1823
7UVZ|1|A|G|1824
7UVZ|1|A|A|1825
7UVZ|1|A|U|1826
*
7UVZ|1|A|A|1971
7UVZ|1|A|U|1972
7UVZ|1|A|A|1973
7UVZ|1|A|A|1974
7UVZ|1|A|U|1975
Current chains
- Chain A
- 23s ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
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