J4_7Z34_006
3D structure
- PDB id
- 7Z34 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of pre-60S particle bound to DRG1(AFG2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GACUG*CAUAG*UGAUUU*GAUUAAC
- Length
- 23 nucleotides
- Bulged bases
- 7Z34|1|1|U|2319
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7Z34_006 not in the Motif Atlas
- Homologous match to J4_8C3A_006
- Geometric discrepancy: 0.5625
- The information below is about J4_8C3A_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7Z34|1|1|G|2130
7Z34|1|1|A|2131
7Z34|1|1|C|2132
7Z34|1|1|U|2133
7Z34|1|1|G|2134
*
7Z34|1|1|C|2146
7Z34|1|1|A|2147
7Z34|1|1|U|2148
7Z34|1|1|A|2149
7Z34|1|1|G|2150
*
7Z34|1|1|U|2186
7Z34|1|1|G|2187
7Z34|1|1|A|2188
7Z34|1|1|U|2189
7Z34|1|1|U|2190
7Z34|1|1|U|2191
*
7Z34|1|1|G|2316
7Z34|1|1|A|2317
7Z34|1|1|U|2318
7Z34|1|1|U|2319
7Z34|1|1|A|2320
7Z34|1|1|A|2321
7Z34|1|1|C|2322
Current chains
- Chain 1
- 35S pre-ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L2-A
- Chain p
- 60S ribosomal protein L43-A
Coloring options: