J4_7ZUW_005
3D structure
- PDB id
- 7ZUW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- CAAAUAU*AG*UGAU*AG
- Length
- 15 nucleotides
- Bulged bases
- 7ZUW|1|5|A|1453, 7ZUW|1|5|U|1456
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7ZUW_005 not in the Motif Atlas
- Homologous match to J4_8P9A_014
- Geometric discrepancy: 0.0936
- The information below is about J4_8P9A_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_34212.1
- Basepair signature
- cWW-F-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
7ZUW|1|5|C|1452
7ZUW|1|5|A|1453
7ZUW|1|5|A|1454
7ZUW|1|5|A|1455
7ZUW|1|5|U|1456
7ZUW|1|5|A|1457
7ZUW|1|5|U|1458
*
7ZUW|1|5|A|1476
7ZUW|1|5|G|1477
*
7ZUW|1|5|U|1878
7ZUW|1|5|G|1879
7ZUW|1|5|A|1880
7ZUW|1|5|U|1881
*
7ZUW|1|5|A|2353
7ZUW|1|5|G|2354
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BO
- 60S ribosomal protein L17-A
- Chain BQ
- 60S ribosomal protein L19-A
- Chain Bc
- 60S ribosomal protein L31-A
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