J4_7ZUW_006
3D structure
- PDB id
- 7ZUW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- GGUUC*GGUUAG*CC*GGUCGUAC
- Length
- 21 nucleotides
- Bulged bases
- 7ZUW|1|5|U|1524
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7ZUW_006 not in the Motif Atlas
- Homologous match to J4_8P9A_015
- Geometric discrepancy: 0.0628
- The information below is about J4_8P9A_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_47264.1
- Basepair signature
- cWW-F-cHW-F-tHW-F-cWW-F-F-F-F-F-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7ZUW|1|5|G|1493
7ZUW|1|5|G|1494
7ZUW|1|5|U|1495
7ZUW|1|5|U|1496
7ZUW|1|5|C|1497
*
7ZUW|1|5|G|1521
7ZUW|1|5|G|1522
7ZUW|1|5|U|1523
7ZUW|1|5|U|1524
7ZUW|1|5|A|1525
7ZUW|1|5|G|1526
*
7ZUW|1|5|C|1615
7ZUW|1|5|C|1616
*
7ZUW|1|5|G|1830
7ZUW|1|5|G|1831
7ZUW|1|5|U|1832
7ZUW|1|5|C|1833
7ZUW|1|5|G|1834
7ZUW|1|5|U|1835
7ZUW|1|5|A|1836
7ZUW|1|5|C|1837
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BQ
- 60S ribosomal protein L19-A
- Chain BW
- 60S ribosomal protein L25
- Chain Bf
- 60S ribosomal protein L34-A
- Chain Bi
- 60S ribosomal protein L37-A
- Chain Bj
- RPL38 isoform 1
- Chain Bk
- 60S ribosomal protein L39
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