J4_7ZUW_008
3D structure
- PDB id
- 7ZUW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- GACUG*CAUAG*UGAUU*AUUAAC
- Length
- 21 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7ZUW_008 not in the Motif Atlas
- Homologous match to J4_8P9A_017
- Geometric discrepancy: 0.0658
- The information below is about J4_8P9A_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_78485.1
- Basepair signature
- cWW-tSW-F-F-tHS-F-cWW-F-cWW-F-F-tHS-F-cWW
- Number of instances in this motif group
- 6
Unit IDs
7ZUW|1|5|G|2131
7ZUW|1|5|A|2132
7ZUW|1|5|C|2133
7ZUW|1|5|U|2134
7ZUW|1|5|G|2135
*
7ZUW|1|5|C|2147
7ZUW|1|5|A|2148
7ZUW|1|5|U|2149
7ZUW|1|5|A|2150
7ZUW|1|5|G|2151
*
7ZUW|1|5|U|2187
7ZUW|1|5|G|2188
7ZUW|1|5|A|2189
7ZUW|1|5|U|2190
7ZUW|1|5|U|2191
*
7ZUW|1|5|A|2318
7ZUW|1|5|U|2319
7ZUW|1|5|U|2320
7ZUW|1|5|A|2321
7ZUW|1|5|A|2322
7ZUW|1|5|C|2323
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain BA
- 60S ribosomal protein L2-A
- Chain Bm
- 60S ribosomal protein L41
- Chain Bo
- 60S ribosomal protein L43-A
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