J4_7ZUW_011
3D structure
- PDB id
- 7ZUW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- UAA*UC*GCU*AUG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7ZUW_011 not in the Motif Atlas
- Homologous match to J4_8P9A_020
- Geometric discrepancy: 0.103
- The information below is about J4_8P9A_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_37757.1
- Basepair signature
- cWW-tSS-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7ZUW|1|5|U|3011
7ZUW|1|5|A|3012
7ZUW|1|5|A|3013
*
7ZUW|1|5|U|3043
7ZUW|1|5|C|3044
*
7ZUW|1|5|G|3099
7ZUW|1|5|C|3100
7ZUW|1|5|U|3101
*
7ZUW|1|5|A|3135
7ZUW|1|5|U|3136
7ZUW|1|5|G|3137
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BB
- 60S ribosomal protein L3
- Chain BN
- 60S ribosomal protein L16-A
- Chain BU
- 60S ribosomal protein L23-A
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