J4_8B0X_013
3D structure
- PDB id
- 8B0X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translating 70S ribosome in the unrotated state (P and E, tRNAs)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.55 Å
Loop
- Sequence
- CGAAG*UUGAC*GGU*AGG
- Length
- 16 nucleotides
- Bulged bases
- 8B0X|1|a|A|2292, 8B0X|1|a|G|2386
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_98139.1
- Basepair signature
- cWW-F-cWW-tWW-tHH-cWW-cHW-cWW
- Number of instances in this motif group
- 6
Unit IDs
8B0X|1|a|C|2289
8B0X|1|a|G|2290
8B0X|1|a|A|2291
8B0X|1|a|A|2292
8B0X|1|a|G|2293
*
8B0X|1|a|U|2347
8B0X|1|a|U|2348
8B0X|1|a|G|2349
8B0X|1|a|A|2350
8B0X|1|a|C|2351
*
8B0X|1|a|G|2374
8B0X|1|a|G|2375
8B0X|1|a|U|2376
*
8B0X|1|a|A|2385
8B0X|1|a|G|2386
8B0X|1|a|G|2387
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L33
- Chain 2
- 50S ribosomal protein L35
- Chain n
- 50S ribosomal protein L18
- Chain v
- 50S ribosomal protein L27
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