J4_8BHL_008
3D structure
- PDB id
- 8BHL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- AACUG*CACAG*UGAC*GUAAU
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_8BHL_008 not in the Motif Atlas
- Homologous match to J4_5J7L_025
- Geometric discrepancy: 0.1069
- The information below is about J4_5J7L_025
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_61477.5
- Basepair signature
- cWW-tSW-F-tHS-tHS-F-cWW-cWW-F-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
8BHL|1|0|A|1772
8BHL|1|0|A|1773
8BHL|1|0|C|1774
8BHL|1|0|U|1775
8BHL|1|0|G|1776
*
8BHL|1|0|C|1788
8BHL|1|0|A|1789
8BHL|1|0|C|1790
8BHL|1|0|A|1791
8BHL|1|0|G|1792
*
8BHL|1|0|U|1827
8BHL|1|0|G|1828
8BHL|1|0|A|1829
8BHL|1|0|C|1830
*
8BHL|1|0|G|1975
8BHL|1|0|U|1976
8BHL|1|0|A|1977
8BHL|1|0|A|1978
8BHL|1|0|U|1979
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain A
- 50S ribosomal protein L2
Coloring options: