J4_8ETI_001
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UC*GAGUCG*CUAAAUG*UAAA
- Length
- 19 nucleotides
- Bulged bases
- 8ETI|1|1|U|306
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_8ETI_001 not in the Motif Atlas
- Homologous match to J4_8C3A_001
- Geometric discrepancy: 0.1342
- The information below is about J4_8C3A_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ETI|1|1|U|112
8ETI|1|1|C|113
*
8ETI|1|1|G|275
8ETI|1|1|A|276
8ETI|1|1|G|277
8ETI|1|1|U|278
8ETI|1|1|C|279
8ETI|1|1|G|280
*
8ETI|1|1|C|301
8ETI|1|1|U|302
8ETI|1|1|A|303
8ETI|1|1|A|304
8ETI|1|1|A|305
8ETI|1|1|U|306
8ETI|1|1|G|307
*
8ETI|1|1|U|324
8ETI|1|1|A|325
8ETI|1|1|A|326
8ETI|1|1|A|327
Current chains
- Chain 1
- RNA (1564-MER)
Nearby chains
- Chain A
- Ribosome biogenesis protein brx1
- Chain L
- 60S ribosomal protein L13
- Chain N
- 60S ribosomal protein L15-A
- Chain h
- 60S ribosomal protein L35
- Chain i
- 60S ribosomal protein L36-B
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