J4_8FL3_007

3D structure

PDB id

8FL3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State I2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

GUA(A2M)*(OMU)C*GUG*CGCC

Length

13 nucleotides

Bulged bases

8FL3|1|L3|U|4677

QA status

Modified nucleotides: A2M, OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL3|1|L3|G|4587
8FL3|1|L3|U|4588
8FL3|1|L3|A|4589
8FL3|1|L3|A2M|4590
*
8FL3|1|L3|OMU|4620
8FL3|1|L3|C|4621
*
8FL3|1|L3|G|4676
8FL3|1|L3|U|4677
8FL3|1|L3|G|4678
*
8FL3|1|L3|C|4712
8FL3|1|L3|G|4713
8FL3|1|L3|C|4714
8FL3|1|L3|C|4715

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L7

60S ribosomal protein L13a

Chain LG

60S ribosomal protein L23

Chain LN

60S ribosomal protein L3

Chain NK

Protein LLP homolog