J4_8QPP_012
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GACUG*CACAG*UGAC*GCAAC
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_8QPP_012 not in the Motif Atlas
- Homologous match to J4_5J7L_025
- Geometric discrepancy: 0.0704
- The information below is about J4_5J7L_025
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_61477.5
- Basepair signature
- cWW-tSW-F-tHS-tHS-F-cWW-cWW-F-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
8QPP|1|X|G|1801
8QPP|1|X|A|1802
8QPP|1|X|C|1803
8QPP|1|X|U|1804
8QPP|1|X|G|1805
*
8QPP|1|X|C|1817
8QPP|1|X|A|1818
8QPP|1|X|C|1819
8QPP|1|X|A|1820
8QPP|1|X|G|1821
*
8QPP|1|X|U|1856
8QPP|1|X|G|1857
8QPP|1|X|A|1858
8QPP|1|X|C|1859
*
8QPP|1|X|G|2004
8QPP|1|X|C|2005
8QPP|1|X|A|2006
8QPP|1|X|A|2007
8QPP|1|X|C|2008
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain Z
- Large ribosomal subunit protein uL2
Coloring options: