J4_8RCS_008

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

AACUG*CACAG*UGAC*GUAAU

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_8RCS_008 not in the Motif Atlas

Homologous match to J4_5J7L_025

Geometric discrepancy: 0.0555

The information below is about J4_5J7L_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_61477.5

Basepair signature

cWW-tSW-F-tHS-tHS-F-cWW-cWW-F-tHS-cWW

Number of instances in this motif group

4

Unit IDs

8RCS|1|72|A|1772
8RCS|1|72|A|1773
8RCS|1|72|C|1774
8RCS|1|72|U|1775
8RCS|1|72|G|1776
*
8RCS|1|72|C|1788
8RCS|1|72|A|1789
8RCS|1|72|C|1790
8RCS|1|72|A|1791
8RCS|1|72|G|1792
*
8RCS|1|72|U|1827
8RCS|1|72|G|1828
8RCS|1|72|A|1829
8RCS|1|72|C|1830
*
8RCS|1|72|G|1975
8RCS|1|72|U|1976
8RCS|1|72|A|1977
8RCS|1|72|A|1978
8RCS|1|72|U|1979

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain b2

50S ribosomal protein L2