3D structure

PDB id
8RCT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Escherichia coli paused disome complex (Rotated disome interface class 2)
Experimental method
ELECTRON MICROSCOPY
Resolution
5.32 Å

Loop

Sequence
CGAAG*UUGAC*GGU*AGG
Length
16 nucleotides
Bulged bases
8RCT|1|72|A|2288, 8RCT|1|72|G|2382
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J4_8RCT_010 not in the Motif Atlas
Homologous match to J4_5J7L_027
Geometric discrepancy: 0.0706
The information below is about J4_5J7L_027
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J4_04930.6
Basepair signature
cWW-F-F-tWW-tHH-cWW-cWW-cHW-cWW
Number of instances in this motif group
7

Unit IDs

8RCT|1|72|C|2285
8RCT|1|72|G|2286
8RCT|1|72|A|2287
8RCT|1|72|A|2288
8RCT|1|72|G|2289
*
8RCT|1|72|U|2343
8RCT|1|72|U|2344
8RCT|1|72|G|2345
8RCT|1|72|A|2346
8RCT|1|72|C|2347
*
8RCT|1|72|G|2370
8RCT|1|72|G|2371
8RCT|1|72|U|2372
*
8RCT|1|72|A|2381
8RCT|1|72|G|2382
8RCT|1|72|G|2383

Current chains

Chain 72
23S ribosomal RNA

Nearby chains

Chain 62
50S ribosomal protein L35
Chain g2
50S ribosomal protein L33
Chain z2
50S ribosomal protein L27

Coloring options:


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