J4_8URM_010

3D structure

PDB id

8URM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAAG*UUGAC*GGU*AGG

Length

16 nucleotides

Bulged bases

8URM|1|1|A|2288

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8URM|1|1|C|2285
8URM|1|1|G|2286
8URM|1|1|A|2287
8URM|1|1|A|2288
8URM|1|1|G|2289
*
8URM|1|1|U|2343
8URM|1|1|U|2344
8URM|1|1|G|2345
8URM|1|1|A|2346
8URM|1|1|C|2347
*
8URM|1|1|G|2370
8URM|1|1|G|2371
8URM|1|1|U|2372
*
8URM|1|1|A|2381
8URM|1|1|G|2382
8URM|1|1|G|2383

Current chains

Chain 1

13S ribosomal RNA

Nearby chains

Chain O

Large ribosomal subunit protein uL18

Chain W

Large ribosomal subunit protein bL27

Chain c

50S ribosomal protein L33

Chain e

50S ribosomal protein L35