J4_8V03_010

3D structure

PDB id

8V03 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CGAAG*UUGAC*GGU*AGG

Length

16 nucleotides

Bulged bases

8V03|1|1|A|2288

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8V03|1|1|C|2285
8V03|1|1|G|2286
8V03|1|1|A|2287
8V03|1|1|A|2288
8V03|1|1|G|2289
*
8V03|1|1|U|2343
8V03|1|1|U|2344
8V03|1|1|G|2345
8V03|1|1|A|2346
8V03|1|1|C|2347
*
8V03|1|1|G|2370
8V03|1|1|G|2371
8V03|1|1|U|2372
*
8V03|1|1|A|2381
8V03|1|1|G|2382
8V03|1|1|G|2383

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain O

Large ribosomal subunit protein uL18

Chain W

Large ribosomal subunit protein bL27

Chain c

50S ribosomal protein L33

Chain e

50S ribosomal protein L35