J4_8VV4_009

3D structure

PDB id

8VV4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGAAG*UUGAC*GGU*AGG

Length

16 nucleotides

Bulged bases

8VV4|1|1|A|2288

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VV4|1|1|C|2285
8VV4|1|1|G|2286
8VV4|1|1|A|2287
8VV4|1|1|A|2288
8VV4|1|1|G|2289
*
8VV4|1|1|U|2343
8VV4|1|1|U|2344
8VV4|1|1|G|2345
8VV4|1|1|A|2346
8VV4|1|1|C|2347
*
8VV4|1|1|G|2370
8VV4|1|1|G|2371
8VV4|1|1|U|2372
*
8VV4|1|1|A|2381
8VV4|1|1|G|2382
8VV4|1|1|G|2383

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain O

50S ribosomal protein L18

Chain W

Large ribosomal subunit protein bL27

Chain c

Large ribosomal subunit protein bL33

Chain e

50S ribosomal protein L35