J4_8VVQ_012
3D structure
- PDB id
- 8VVQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUG*CG*CUUAAGGUAG*UGAAUG
- Length
- 21 nucleotides
- Bulged bases
- 8VVQ|1|WA|U|3820
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVQ|1|WA|C|3698
8VVQ|1|WA|U|3699
8VVQ|1|WA|G|3700
*
8VVQ|1|WA|C|3754
8VVQ|1|WA|G|3755
*
8VVQ|1|WA|C|3773
8VVQ|1|WA|U|3774
8VVQ|1|WA|U|3775
8VVQ|1|WA|A|3776
8VVQ|1|WA|A|3777
8VVQ|1|WA|G|3778
8VVQ|1|WA|G|3779
8VVQ|1|WA|U|3780
8VVQ|1|WA|A|3781
8VVQ|1|WA|G|3782
*
8VVQ|1|WA|U|3816
8VVQ|1|WA|G|3817
8VVQ|1|WA|A|3818
8VVQ|1|WA|A|3819
8VVQ|1|WA|U|3820
8VVQ|1|WA|G|3821
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain A
- uL2
- Chain MA
- eL41
- Chain SA
- Transfer RNA; tRNA
- Chain ZA
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: