J4_8VVQ_014

3D structure

PDB id

8VVQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GUAA*UC*GUG*CGCC

Length

13 nucleotides

Bulged bases

8VVQ|1|WA|U|4679

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVQ|1|WA|G|4589
8VVQ|1|WA|U|4590
8VVQ|1|WA|A|4591
8VVQ|1|WA|A|4592
*
8VVQ|1|WA|U|4622
8VVQ|1|WA|C|4623
*
8VVQ|1|WA|G|4678
8VVQ|1|WA|U|4679
8VVQ|1|WA|G|4680
*
8VVQ|1|WA|C|4714
8VVQ|1|WA|G|4715
8VVQ|1|WA|C|4716
8VVQ|1|WA|C|4717

Current chains

Chain WA

28S rRNA

Nearby chains

Chain B

uL3

Chain N

uL13

Chain U

L23