J4_8VWQ_009
3D structure
- PDB id
- 8VWQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the closed conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAG*UUGAC*GGU*AGG
- Length
- 16 nucleotides
- Bulged bases
- 8VWQ|1|1|A|2288
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VWQ|1|1|C|2285
8VWQ|1|1|G|2286
8VWQ|1|1|A|2287
8VWQ|1|1|A|2288
8VWQ|1|1|G|2289
*
8VWQ|1|1|U|2343
8VWQ|1|1|U|2344
8VWQ|1|1|G|2345
8VWQ|1|1|A|2346
8VWQ|1|1|C|2347
*
8VWQ|1|1|G|2370
8VWQ|1|1|G|2371
8VWQ|1|1|U|2372
*
8VWQ|1|1|A|2381
8VWQ|1|1|G|2382
8VWQ|1|1|G|2383
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain A
- Large ribosomal subunit protein uL1
- Chain O
- 50S ribosomal protein L18
- Chain W
- Large ribosomal subunit protein bL27
- Chain c
- Large ribosomal subunit protein bL33
- Chain e
- 50S ribosomal protein L35
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